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Conformers: ABBIImiBZICOPNSYNN
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NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI

Results of the assignment of 195 detected steps in 15 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011fhk-m10_A_G1_G2AAAAA00750.22 AA00
0021fhk-m11_A_G1_G2AAAAA08760.17 AA08
0031fhk-m12_A_G1_G2AAAAA00850.15 AA00
0041fhk-m13_A_G1_G2AAAAA00680.18 AA00
0051fhk-m14_A_G1_G2AAAAA00730.19 AA00
0061fhk-m15_A_G1_G2AAAAA00730.22 AA00
0071fhk-m1_A_G1_G2AAAAA00600.26 AA00
0081fhk-m2_A_G1_G2AAAAA00590.26 AA00
0091fhk-m3_A_G1_G2AAAAA00640.23 AA00
0101fhk-m4_A_G1_G2AAAAA00840.19 AA00
0111fhk-m5_A_G1_G2AAAAA00690.18 AA00
0121fhk-m6_A_G1_G2AAAAA00630.22 AA00
0131fhk-m7_A_G1_G2AAAAA08640.23 AA08
0141fhk-m8_A_G1_G2AAAAA08800.17 AA08
0151fhk-m9_A_G1_G2AAAAA00510.19 AA00
0161fhk-m10_A_G2_C3AAAAA00570.28 AA00
0171fhk-m11_A_G2_C3AAAAA00320.40 AA00
0181fhk-m12_A_G2_C3AAAAA04880.28 AA04
0191fhk-m13_A_G2_C3AAAAA00640.29 AA00
0201fhk-m14_A_G2_C3AAAAA00710.32 AA00
0211fhk-m15_A_G2_C3AAAAA00560.30 AA00
0221fhk-m1_A_G2_C3AAAAA00660.31 AA00
0231fhk-m2_A_G2_C3AAAAA00660.31 AA00
0241fhk-m3_A_G2_C3AAAAA04860.16 AA04
0251fhk-m4_A_G2_C3AAAAA00210.35 AA00
0261fhk-m5_A_G2_C3AAAAA00720.30 AA00
0271fhk-m6_A_G2_C3AAAAA00660.27 AA00
0281fhk-m7_A_G2_C3AAAAA00640.29 AA00
0291fhk-m8_A_G2_C3AAAAA00750.26 AA00
0301fhk-m9_A_G2_C3AAAAA00670.30 AA00
0311fhk-m10_A_C3_G4NANNANT00.48 AA00
0321fhk-m11_A_C3_G4AAAAA04620.47 AA04
0331fhk-m12_A_C3_G4AAAAA04430.52 AA04
0341fhk-m13_A_C3_G4AAAAA04420.52 AA04
0351fhk-m14_A_C3_G4AAAAA04470.46 AA04
0361fhk-m15_A_C3_G4AAAAA04260.57 AA04
0371fhk-m1_A_C3_G4AAAAA04510.49 AA04
0381fhk-m2_A_C3_G4AAAAA04510.49 AA04
0391fhk-m3_A_C3_G4AAAAA04350.55 AA04
0401fhk-m4_A_C3_G4AAAAA04470.54 AA04
0411fhk-m5_A_C3_G4AAAAA04430.52 AA04
0421fhk-m6_A_C3_G4AAAAA04620.48 AA04
0431fhk-m7_A_C3_G4AAAAA04500.56 AA04
0441fhk-m8_A_C3_G4AAAAA00340.40 AA00
0451fhk-m9_A_C3_G4AAAAA00380.51 AA00
0461fhk-m10_A_G4_G5AAAAA00620.22 AA00
0471fhk-m11_A_G4_G5AAAAA00450.22 AA00
0481fhk-m12_A_G4_G5AAAAA00380.24 AA00
0491fhk-m13_A_G4_G5AAAAA00240.32 AA00
0501fhk-m14_A_G4_G5AAAAA00660.20 AA00
0511fhk-m15_A_G4_G5AAAAA00550.23 AA00
0521fhk-m1_A_G4_G5AAAAA00590.19 AA00
0531fhk-m2_A_G4_G5AAAAA00590.19 AA00
0541fhk-m3_A_G4_G5AAAAA00460.21 AA00
0551fhk-m4_A_G4_G5AAAAA00230.25 AA00
0561fhk-m5_A_G4_G5AAAAA00570.28 AA00
0571fhk-m6_A_G4_G5AAAAA00610.21 AA00
0581fhk-m7_A_G4_G5AAAAA00650.23 AA00
0591fhk-m8_A_G4_G5AAAAA00370.20 AA00
0601fhk-m9_A_G4_G5AAAAA00600.21 AA00
0611fhk-m10_A_G5_U6AAAAA00390.38 AA00
0621fhk-m11_A_G5_U6AAAAA00530.29 AA00
0631fhk-m12_A_G5_U6AAAAA00430.27 AA00
0641fhk-m13_A_G5_U6AAAAA00180.33 AA00
0651fhk-m14_A_G5_U6AAAAA00590.27 AA00
0661fhk-m15_A_G5_U6AAAAA00300.31 AA00
0671fhk-m1_A_G5_U6AAAAA00460.26 AA00
0681fhk-m2_A_G5_U6AAAAA00460.26 AA00
0691fhk-m3_A_G5_U6AAAAA00430.26 AA00
0701fhk-m4_A_G5_U6AAAAA00470.28 AA00
0711fhk-m5_A_G5_U6AAAAA00680.27 AA00
0721fhk-m6_A_G5_U6AAAAA00660.19 AA00
0731fhk-m7_A_G5_U6AAAAA00420.26 AA00
0741fhk-m8_A_G5_U6AAAAA00350.27 AA00
0751fhk-m9_A_G5_U6AAAAA00680.21 AA00
0761fhk-m10_A_U6_G7OPNOP04400.25 OP04
0771fhk-m11_A_U6_G7OPNOP04450.25 OP04
0781fhk-m12_A_U6_G7OPNOP04270.29 OP04
0791fhk-m13_A_U6_G7OPNOP04260.29 OP04
0801fhk-m14_A_U6_G7OPNOP04320.27 OP04
0811fhk-m15_A_U6_G7OPNOP04380.27 OP04
0821fhk-m1_A_U6_G7OPNOP04440.23 OP04
0831fhk-m2_A_U6_G7OPNOP04440.23 OP04
0841fhk-m3_A_U6_G7OPNOP04540.23 OP04
0851fhk-m4_A_U6_G7OPNOP04610.22 OP04
0861fhk-m5_A_U6_G7OPNOP04570.21 OP04
0871fhk-m6_A_U6_G7OPNOP04750.20 OP04
0881fhk-m7_A_U6_G7OPNOP04630.24 OP04
0891fhk-m8_A_U6_G7OPNOP04220.30 OP04
0901fhk-m9_A_U6_G7OPNOP04380.25 OP04
0911fhk-m10_A_G7_A8AAAAA04570.42 AA04
0921fhk-m11_A_G7_A8AAAAA00470.38 AA00
0931fhk-m12_A_G7_A8AAAAA00320.36 AA00
0941fhk-m13_A_G7_A8AAAAA00250.37 AA00
0951fhk-m14_A_G7_A8AAAAA00560.33 AA00
0961fhk-m15_A_G7_A8AAAAA08620.25 AA08
0971fhk-m1_A_G7_A8AAAAA00270.39 AA00
0981fhk-m2_A_G7_A8AAAAA00270.39 AA00
0991fhk-m3_A_G7_A8AAAAA00430.39 AA00
1001fhk-m4_A_G7_A8AAAAA00700.32 AA00
1011fhk-m5_A_G7_A8AAAAA00580.37 AA00
1021fhk-m6_A_G7_A8AAAAA04720.38 AA04
1031fhk-m7_A_G7_A8AAAAA00680.34 AA00
1041fhk-m8_A_G7_A8AAAAA00360.42 AA00
1051fhk-m9_A_G7_A8AAAAA04430.46 AA04
1061fhk-m10_A_A8_A9AAwAA01370.39 AA01
1071fhk-m11_A_A8_A9AAwAA01310.43 AA01
1081fhk-m12_A_A8_A9AAwAA05230.52 AA05
1091fhk-m13_A_A8_A9AAwAA01450.35 AA01
1101fhk-m14_A_A8_A9AAwAA01340.42 AA01
1111fhk-m15_A_A8_A9AAwAA05120.48 AA05
1121fhk-m1_A_A8_A9AAwAA01240.40 AA01
1131fhk-m2_A_A8_A9AAwAA01240.40 AA01
1141fhk-m3_A_A8_A9AAwAA05240.49 AA05
1151fhk-m4_A_A8_A9AAwAA01390.38 AA01
1161fhk-m5_A_A8_A9AAwAA01490.38 AA01
1171fhk-m6_A_A8_A9AAwAA01190.43 AA01
1181fhk-m7_A_A8_A9AAwAA01690.30 AA01
1191fhk-m8_A_A8_A9AAwAA01430.40 AA01
1201fhk-m9_A_A8_A9NANNANT00.52 AA01
1211fhk-m10_A_A9_A10AAAAA00560.37 AA00
1221fhk-m11_A_A9_A10AAAAA08600.29 AA08
1231fhk-m12_A_A9_A10AAAAA00230.38 AA00
1241fhk-m13_A_A9_A10AAAAA00520.32 AA00
1251fhk-m14_A_A9_A10AAAAA00410.34 AA00
1261fhk-m15_A_A9_A10AAAAA08550.34 AA08
1271fhk-m1_A_A9_A10AAAAA00130.45 AA00
1281fhk-m2_A_A9_A10AAAAA00130.45 AA00
1291fhk-m3_A_A9_A10AAAAA00370.36 AA00
1301fhk-m4_A_A9_A10AAAAA00620.31 AA00
1311fhk-m5_A_A9_A10AAAAA00500.39 AA00
1321fhk-m6_A_A9_A10AAAAA00410.32 AA00
1331fhk-m7_A_A9_A10AAAAA00430.34 AA00
1341fhk-m8_A_A9_A10AAAAA00470.34 AA00
1351fhk-m9_A_A9_A10AAAAA00250.40 AA00
1361fhk-m10_A_A10_U11AAAAA00680.36 AA00
1371fhk-m11_A_A10_U11AAAAA00620.26 AA00
1381fhk-m12_A_A10_U11AAAAA00430.41 AA00
1391fhk-m13_A_A10_U11AAAAA04330.49 AA04
1401fhk-m14_A_A10_U11AAAAA00870.22 AA00
1411fhk-m15_A_A10_U11AAAAA00550.35 AA00
1421fhk-m1_A_A10_U11AAAAA00800.25 AA00
1431fhk-m2_A_A10_U11AAAAA00800.25 AA00
1441fhk-m3_A_A10_U11AAAAA00410.42 AA00
1451fhk-m4_A_A10_U11AAAAA04770.38 AA04
1461fhk-m5_A_A10_U11AAAAA00440.35 AA00
1471fhk-m6_A_A10_U11AAAAA00530.43 AA00
1481fhk-m7_A_A10_U11AAAAA04680.48 AA04
1491fhk-m8_A_A10_U11AAAAA00870.21 AA00
1501fhk-m9_A_A10_U11AAAAA00740.28 AA00
1511fhk-m10_A_U11_G12AAAAA04390.52 AA04
1521fhk-m11_A_U11_G12AAAAA04160.56 AA04
1531fhk-m12_A_U11_G12AAAAA04470.51 AA04
1541fhk-m13_A_U11_G12AAAAA08390.46 AA08
1551fhk-m14_A_U11_G12AAAAA08400.44 AA08
1561fhk-m15_A_U11_G12AAAAA04480.56 AA04
1571fhk-m1_A_U11_G12AAAAA00120.50 AA00
1581fhk-m2_A_U11_G12AAAAA00120.50 AA00
1591fhk-m3_A_U11_G12AAAAA04520.59 AA04
1601fhk-m4_A_U11_G12AAAAA04210.56 AA04
1611fhk-m5_A_U11_G12AAAAA04400.49 AA04
1621fhk-m6_A_U11_G12AAAAA04460.48 AA04
1631fhk-m7_A_U11_G12AAAAA00160.47 AA00
1641fhk-m8_A_U11_G12AAAAA04320.54 AA04
1651fhk-m9_A_U11_G12AAAAA04630.44 AA04
1661fhk-m10_A_G12_C13AAAAA00900.15 AA00
1671fhk-m11_A_G12_C13AAAAA00750.24 AA00
1681fhk-m12_A_G12_C13AAAAA00940.17 AA00
1691fhk-m13_A_G12_C13AAAAA00820.13 AA00
1701fhk-m14_A_G12_C13AAAAA00770.23 AA00
1711fhk-m15_A_G12_C13AAAAA00900.13 AA00
1721fhk-m1_A_G12_C13AAAAA00850.20 AA00
1731fhk-m2_A_G12_C13AAAAA00850.20 AA00
1741fhk-m3_A_G12_C13AAAAA00750.28 AA00
1751fhk-m4_A_G12_C13AAAAA00870.16 AA00
1761fhk-m5_A_G12_C13AAAAA00770.17 AA00
1771fhk-m6_A_G12_C13AAAAA00920.20 AA00
1781fhk-m7_A_G12_C13AAAAA00890.16 AA00
1791fhk-m8_A_G12_C13AAAAA00800.24 AA00
1801fhk-m9_A_G12_C13AAAAA00850.16 AA00
1811fhk-m10_A_C13_C14AAAAA00870.19 AA00
1821fhk-m11_A_C13_C14AAAAA00750.31 AA00
1831fhk-m12_A_C13_C14AAAAA00450.30 AA00
1841fhk-m13_A_C13_C14AAAAA00680.27 AA00
1851fhk-m14_A_C13_C14AAAAA00780.27 AA00
1861fhk-m15_A_C13_C14AAAAA08460.24 AA08
1871fhk-m1_A_C13_C14AAAAA00370.30 AA00
1881fhk-m2_A_C13_C14AAAAA00370.30 AA00
1891fhk-m3_A_C13_C14AAAAA00630.31 AA00
1901fhk-m4_A_C13_C14AAAAA00940.14 AA00
1911fhk-m5_A_C13_C14AAAAA00420.44 AA00
1921fhk-m6_A_C13_C14AAAAA00790.28 AA00
1931fhk-m7_A_C13_C14AAAAA00720.24 AA00
1941fhk-m8_A_C13_C14AAAAA08560.27 AA08
1951fhk-m9_A_C13_C14AAAAA00660.24 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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