DNATCO v4.1: results

SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE

Results of the assignment of 260 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1f85-m10_A_G1_G2	AAw	AA01	26	0.35	AA01
002	1f85-m11_A_G1_G2	NAN	NANT	0	0.69	AA03
003	1f85-m12_A_G1_G2	NAN	NANT	0	0.84	AA01
004	1f85-m13_A_G1_G2	NAN	NANT	0	0.58	AA01
005	1f85-m14_A_G1_G2	NAN	NANT	0	0.90	AA01
006	1f85-m15_A_G1_G2	AAw	AA10	7	0.50	AA10
007	1f85-m16_A_G1_G2	NAN	NANT	0	0.87	AA01
008	1f85-m17_A_G1_G2	NAN	NANT	0	0.92	AA01
009	1f85-m18_A_G1_G2	NAN	NANT	0	0.66	AA12
010	1f85-m19_A_G1_G2	AAw	AA01	8	0.64	AA01
011	1f85-m1_A_G1_G2	AAw	AA01	32	0.40	AA01
012	1f85-m20_A_G1_G2	AAw	AA01	37	0.40	AA01
013	1f85-m2_A_G1_G2	NAN	NANT	0	1.07	AA05
014	1f85-m3_A_G1_G2	NAN	NANT	0	1.07	AA05
015	1f85-m4_A_G1_G2	NAN	NANT	0	0.74	AA04
016	1f85-m5_A_G1_G2	NAN	NANT	0	1.51	OP19
017	1f85-m6_A_G1_G2	NAN	NANT	0	0.66	AA03
018	1f85-m7_A_G1_G2	NAN	NANT	0	0.66	AA03
019	1f85-m8_A_G1_G2	AAw	AA01	19	0.51	AA01
020	1f85-m9_A_G1_G2	NAN	NANT	0	0.75	AA06
021	1f85-m10_A_G2_C3	AAA	AA00	58	0.23	AA00
022	1f85-m11_A_G2_C3	AAA	AA00	52	0.28	AA00
023	1f85-m12_A_G2_C3	AAA	AA00	45	0.34	AA00
024	1f85-m13_A_G2_C3	AAA	AA00	57	0.31	AA00
025	1f85-m14_A_G2_C3	AAA	AA00	50	0.33	AA00
026	1f85-m15_A_G2_C3	AAA	AA00	58	0.26	AA00
027	1f85-m16_A_G2_C3	AAA	AA08	27	0.25	AA08
028	1f85-m17_A_G2_C3	AAA	AA00	60	0.27	AA00
029	1f85-m18_A_G2_C3	AAA	AA08	47	0.20	AA08
030	1f85-m19_A_G2_C3	AAA	AA00	58	0.24	AA00
031	1f85-m1_A_G2_C3	AAA	AA00	58	0.25	AA00
032	1f85-m20_A_G2_C3	AAA	AA00	60	0.23	AA00
033	1f85-m2_A_G2_C3	AAA	AA00	51	0.28	AA00
034	1f85-m3_A_G2_C3	AAA	AA00	51	0.28	AA00
035	1f85-m4_A_G2_C3	AAA	AA00	56	0.26	AA00
036	1f85-m5_A_G2_C3	AAA	AA00	14	0.41	AA00
037	1f85-m6_A_G2_C3	AAA	AA00	13	0.40	AA00
038	1f85-m7_A_G2_C3	AAA	AA00	13	0.40	AA00
039	1f85-m8_A_G2_C3	AAA	AA00	60	0.26	AA00
040	1f85-m9_A_G2_C3	AAA	AA00	54	0.28	AA00
041	1f85-m10_A_C3_C4	AAA	AA00	48	0.23	AA00
042	1f85-m11_A_C3_C4	AAA	AA04	27	0.54	AA04
043	1f85-m12_A_C3_C4	AAA	AA00	25	0.35	AA00
044	1f85-m13_A_C3_C4	AAA	AA00	42	0.27	AA00
045	1f85-m14_A_C3_C4	AAA	AA00	34	0.31	AA00
046	1f85-m15_A_C3_C4	AAA	AA00	45	0.25	AA00
047	1f85-m16_A_C3_C4	AAA	AA00	43	0.27	AA00
048	1f85-m17_A_C3_C4	AAA	AA00	24	0.30	AA00
049	1f85-m18_A_C3_C4	AAA	AA00	55	0.23	AA00
050	1f85-m19_A_C3_C4	AAA	AA00	23	0.31	AA00
051	1f85-m1_A_C3_C4	AAA	AA00	49	0.27	AA00
052	1f85-m20_A_C3_C4	AAA	AA00	34	0.35	AA00
053	1f85-m2_A_C3_C4	AAA	AA00	30	0.33	AA00
054	1f85-m3_A_C3_C4	AAA	AA00	30	0.33	AA00
055	1f85-m4_A_C3_C4	AAA	AA00	39	0.27	AA00
056	1f85-m5_A_C3_C4	AAA	AA03	46	0.30	AA03
057	1f85-m6_A_C3_C4	AAA	AA00	17	0.41	AA00
058	1f85-m7_A_C3_C4	AAA	AA00	17	0.41	AA00
059	1f85-m8_A_C3_C4	AAA	AA00	57	0.19	AA00
060	1f85-m9_A_C3_C4	AAA	AA08	47	0.30	AA08
061	1f85-m10_A_C4_U5	AAA	AA00	57	0.27	AA00
062	1f85-m11_A_C4_U5	AAA	AA00	42	0.28	AA00
063	1f85-m12_A_C4_U5	AAA	AA04	24	0.43	AA04
064	1f85-m13_A_C4_U5	AAA	AA00	54	0.28	AA00
065	1f85-m14_A_C4_U5	AAA	AA00	50	0.28	AA00
066	1f85-m15_A_C4_U5	AAA	AA00	60	0.27	AA00
067	1f85-m16_A_C4_U5	AAA	AA00	56	0.27	AA00
068	1f85-m17_A_C4_U5	AAA	AA00	52	0.29	AA00
069	1f85-m18_A_C4_U5	AAA	AA00	55	0.27	AA00
070	1f85-m19_A_C4_U5	AAA	AA00	60	0.25	AA00
071	1f85-m1_A_C4_U5	AAA	AA00	9	0.35	AA00
072	1f85-m20_A_C4_U5	AAA	AA00	60	0.27	AA00
073	1f85-m2_A_C4_U5	NAN	NANT	0	0.42	AA04
074	1f85-m3_A_C4_U5	NAN	NANT	0	0.42	AA04
075	1f85-m4_A_C4_U5	AAA	AA00	60	0.27	AA00
076	1f85-m5_A_C4_U5	AAA	AA08	33	0.24	AA08
077	1f85-m6_A_C4_U5	NAN	NANT	0	0.42	AA04
078	1f85-m7_A_C4_U5	NAN	NANT	0	0.42	AA04
079	1f85-m8_A_C4_U5	AAA	AA00	47	0.29	AA00
080	1f85-m9_A_C4_U5	AAA	AA00	36	0.33	AA00
081	1f85-m10_A_U5_G6	AAA	AA00	22	0.53	AA00
082	1f85-m11_A_U5_G6	AAA	AA08	16	0.36	AA08
083	1f85-m12_A_U5_G6	AAA	AA08	19	0.33	AA08
084	1f85-m13_A_U5_G6	AAA	AA08	12	0.41	AA08
085	1f85-m14_A_U5_G6	AAA	AA00	22	0.52	AA00
086	1f85-m15_A_U5_G6	AAA	AA00	22	0.51	AA00
087	1f85-m16_A_U5_G6	AAA	AA00	23	0.52	AA00
088	1f85-m17_A_U5_G6	AAA	AA08	17	0.36	AA08
089	1f85-m18_A_U5_G6	AAA	AA08	14	0.39	AA08
090	1f85-m19_A_U5_G6	AAA	AA08	11	0.40	AA08
091	1f85-m1_A_U5_G6	AAA	AA00	21	0.51	AA00
092	1f85-m20_A_U5_G6	AAA	AA00	25	0.48	AA00
093	1f85-m2_A_U5_G6	AAA	AA08	16	0.34	AA08
094	1f85-m3_A_U5_G6	AAA	AA08	16	0.34	AA08
095	1f85-m4_A_U5_G6	AAA	AA08	12	0.39	AA08
096	1f85-m5_A_U5_G6	AAA	AA08	15	0.33	AA08
097	1f85-m6_A_U5_G6	AAA	AA08	20	0.36	AA08
098	1f85-m7_A_U5_G6	AAA	AA08	20	0.36	AA08
099	1f85-m8_A_U5_G6	AAA	AA08	11	0.44	AA08
100	1f85-m9_A_U5_G6	AAA	AA00	14	0.68	AA00
101	1f85-m10_A_G6_A7	A-B	AB03	37	0.41	AB03
102	1f85-m11_A_G6_A7	A-B	AB03	48	0.42	AB03
103	1f85-m12_A_G6_A7	A-B	AB03	46	0.43	AB03
104	1f85-m13_A_G6_A7	A-B	AB03	47	0.42	AB03
105	1f85-m14_A_G6_A7	A-B	AB03	49	0.42	AB03
106	1f85-m15_A_G6_A7	A-B	AB03	34	0.41	AB03
107	1f85-m16_A_G6_A7	A-B	AB03	36	0.40	AB03
108	1f85-m17_A_G6_A7	A-B	AB03	43	0.43	AB03
109	1f85-m18_A_G6_A7	A-B	AB03	45	0.43	AB03
110	1f85-m19_A_G6_A7	A-B	AB03	34	0.40	AB03
111	1f85-m1_A_G6_A7	A-B	AB03	39	0.40	AB03
112	1f85-m20_A_G6_A7	A-B	AB03	33	0.39	AB03
113	1f85-m2_A_G6_A7	A-B	AB03	45	0.43	AB03
114	1f85-m3_A_G6_A7	A-B	AB03	45	0.43	AB03
115	1f85-m4_A_G6_A7	A-B	AB03	41	0.44	AB03
116	1f85-m5_A_G6_A7	A-B	AB03	47	0.43	AB03
117	1f85-m6_A_G6_A7	A-B	AB03	38	0.39	AB03
118	1f85-m7_A_G6_A7	A-B	AB03	38	0.39	AB03
119	1f85-m8_A_G6_A7	A-B	AB03	39	0.40	AB03
120	1f85-m9_A_G6_A7	A-B	AB03	46	0.41	AB03
121	1f85-m10_A_A7_U8	NAN	NANT	0	1.00	BB04
122	1f85-m11_A_A7_U8	NAN	NANT	0	0.79	BB00
123	1f85-m12_A_A7_U8	NAN	NANT	0	0.79	BB00
124	1f85-m13_A_A7_U8	NAN	NANT	0	0.77	BB00
125	1f85-m14_A_A7_U8	NAN	NANT	0	0.76	BB00
126	1f85-m15_A_A7_U8	NAN	NANT	0	0.99	BB04
127	1f85-m16_A_A7_U8	NAN	NANT	0	0.98	BB04
128	1f85-m17_A_A7_U8	NAN	NANT	0	0.76	BB00
129	1f85-m18_A_A7_U8	NAN	NANT	0	0.79	BB00
130	1f85-m19_A_A7_U8	NAN	NANT	0	0.97	BB04
131	1f85-m1_A_A7_U8	NAN	NANT	0	0.99	BB04
132	1f85-m20_A_A7_U8	NAN	NANT	0	0.97	BB04
133	1f85-m2_A_A7_U8	NAN	NANT	0	0.78	BB00
134	1f85-m3_A_A7_U8	NAN	NANT	0	0.78	BB00
135	1f85-m4_A_A7_U8	NAN	NANT	0	0.79	BB00
136	1f85-m5_A_A7_U8	NAN	NANT	0	0.78	BB00
137	1f85-m6_A_A7_U8	NAN	NANT	0	0.98	BB04
138	1f85-m7_A_A7_U8	NAN	NANT	0	0.98	BB04
139	1f85-m8_A_A7_U8	NAN	NANT	0	0.98	BB04
140	1f85-m9_A_A7_U8	NAN	NANT	0	0.99	BB04
141	1f85-m10_A_U8_A9	NAN	NANT	0	1.42	OP27
142	1f85-m11_A_U8_A9	NAN	NANT	0	1.29	OP27
143	1f85-m12_A_U8_A9	NAN	NANT	0	1.29	OP27
144	1f85-m13_A_U8_A9	NAN	NANT	0	1.28	OP27
145	1f85-m14_A_U8_A9	NAN	NANT	0	1.27	OP27
146	1f85-m15_A_U8_A9	NAN	NANT	0	1.41	OP27
147	1f85-m16_A_U8_A9	NAN	NANT	0	1.41	OP27
148	1f85-m17_A_U8_A9	NAN	NANT	0	1.27	OP27
149	1f85-m18_A_U8_A9	NAN	NANT	0	1.29	OP27
150	1f85-m19_A_U8_A9	NAN	NANT	0	1.41	OP27
151	1f85-m1_A_U8_A9	NAN	NANT	0	1.42	OP27
152	1f85-m20_A_U8_A9	NAN	NANT	0	1.41	OP27
153	1f85-m2_A_U8_A9	NAN	NANT	0	1.28	OP27
154	1f85-m3_A_U8_A9	NAN	NANT	0	1.28	OP27
155	1f85-m4_A_U8_A9	NAN	NANT	0	1.30	OP27
156	1f85-m5_A_U8_A9	NAN	NANT	0	1.28	OP27
157	1f85-m6_A_U8_A9	NAN	NANT	0	1.43	OP27
158	1f85-m7_A_U8_A9	NAN	NANT	0	1.43	OP27
159	1f85-m8_A_U8_A9	NAN	NANT	0	1.42	OP27
160	1f85-m9_A_U8_A9	NAN	NANT	0	1.43	OP27
161	1f85-m10_A_A9_G10	NAN	NANT	0	0.72	AA04
162	1f85-m11_A_A9_G10	NAN	NANT	0	0.71	BB17
163	1f85-m12_A_A9_G10	NAN	NANT	0	0.70	AA04
164	1f85-m13_A_A9_G10	NAN	NANT	0	0.68	AA04
165	1f85-m14_A_A9_G10	NAN	NANT	0	0.71	BB17
166	1f85-m15_A_A9_G10	NAN	NANT	0	0.72	AA04
167	1f85-m16_A_A9_G10	NAN	NANT	0	0.72	AA04
168	1f85-m17_A_A9_G10	NAN	NANT	0	0.70	AA04
169	1f85-m18_A_A9_G10	NAN	NANT	0	0.69	AA04
170	1f85-m19_A_A9_G10	NAN	NANT	0	0.72	AA04
171	1f85-m1_A_A9_G10	NAN	NANT	0	0.71	AA04
172	1f85-m20_A_A9_G10	NAN	NANT	0	0.71	AA04
173	1f85-m2_A_A9_G10	NAN	NANT	0	0.69	AA04
174	1f85-m3_A_A9_G10	NAN	NANT	0	0.69	AA04
175	1f85-m4_A_A9_G10	NAN	NANT	0	0.68	AA04
176	1f85-m5_A_A9_G10	NAN	NANT	0	0.71	BB17
177	1f85-m6_A_A9_G10	NAN	NANT	0	0.73	BB17
178	1f85-m7_A_A9_G10	NAN	NANT	0	0.73	BB17
179	1f85-m8_A_A9_G10	NAN	NANT	0	0.71	AA04
180	1f85-m9_A_A9_G10	NAN	NANT	0	0.72	BB17
181	1f85-m10_A_G10_G11	AAw	AA06	16	0.56	AA06
182	1f85-m11_A_G10_G11	AAw	AA06	20	0.56	AA06
183	1f85-m12_A_G10_G11	AAw	AA06	19	0.55	AA06
184	1f85-m13_A_G10_G11	NAN	NANT	0	0.56	AA06
185	1f85-m14_A_G10_G11	AAw	AA06	22	0.55	AA06
186	1f85-m15_A_G10_G11	NAN	NANT	0	0.58	AA06
187	1f85-m16_A_G10_G11	NAN	NANT	0	0.57	AA06
188	1f85-m17_A_G10_G11	NAN	NANT	0	0.60	AA06
189	1f85-m18_A_G10_G11	NAN	NANT	0	0.57	AA06
190	1f85-m19_A_G10_G11	AAw	AA06	16	0.56	AA06
191	1f85-m1_A_G10_G11	AAw	AA06	17	0.55	AA06
192	1f85-m20_A_G10_G11	NAN	NANT	0	0.55	AA06
193	1f85-m2_A_G10_G11	AAw	AA06	19	0.55	AA06
194	1f85-m3_A_G10_G11	AAw	AA06	19	0.55	AA06
195	1f85-m4_A_G10_G11	NAN	NANT	0	0.57	AA06
196	1f85-m5_A_G10_G11	AAw	AA06	16	0.58	AA06
197	1f85-m6_A_G10_G11	AAw	AA01	15	0.37	AA01
198	1f85-m7_A_G10_G11	AAw	AA01	15	0.37	AA01
199	1f85-m8_A_G10_G11	AAw	AA06	16	0.55	AA06
200	1f85-m9_A_G10_G11	AAw	AA01	16	0.38	AA01
201	1f85-m10_A_G11_G12	NAN	NANT	0	0.69	AA10
202	1f85-m11_A_G11_G12	NAN	NANT	0	0.68	AA04
203	1f85-m12_A_G11_G12	NAN	NANT	0	0.85	AA10
204	1f85-m13_A_G11_G12	AAA	AA04	23	0.57	AA04
205	1f85-m14_A_G11_G12	NAN	NANT	0	0.81	AA10
206	1f85-m15_A_G11_G12	NAN	NANT	0	0.53	AA04
207	1f85-m16_A_G11_G12	NAN	NANT	0	0.61	AA06
208	1f85-m17_A_G11_G12	NAN	NANT	0	0.59	AA06
209	1f85-m18_A_G11_G12	AAA	AA04	26	0.51	AA04
210	1f85-m19_A_G11_G12	NAN	NANT	0	0.80	AA10
211	1f85-m1_A_G11_G12	NAN	NANT	0	0.70	AA04
212	1f85-m20_A_G11_G12	NAN	NANT	0	0.59	AA04
213	1f85-m2_A_G11_G12	NAN	NANT	0	0.86	AA10
214	1f85-m3_A_G11_G12	NAN	NANT	0	0.86	AA10
215	1f85-m4_A_G11_G12	AAA	AA08	8	0.40	AA08
216	1f85-m5_A_G11_G12	NAN	NANT	0	0.66	AA04
217	1f85-m6_A_G11_G12	NAN	NANT	0	0.85	AA10
218	1f85-m7_A_G11_G12	NAN	NANT	0	0.85	AA10
219	1f85-m8_A_G11_G12	AAA	AA04	28	0.41	AA04
220	1f85-m9_A_G11_G12	NAN	NANT	0	0.58	AA04
221	1f85-m10_A_G12_U13	AAA	AA00	49	0.24	AA00
222	1f85-m11_A_G12_U13	AAw	AA01	40	0.25	AA01
223	1f85-m12_A_G12_U13	AAw	AA01	24	0.37	AA01
224	1f85-m13_A_G12_U13	AAA	AA00	46	0.20	AA00
225	1f85-m14_A_G12_U13	AAA	AA00	46	0.18	AA00
226	1f85-m15_A_G12_U13	AAA	AA00	46	0.23	AA00
227	1f85-m16_A_G12_U13	AAA	AA08	35	0.26	AA08
228	1f85-m17_A_G12_U13	AAA	AA00	37	0.24	AA00
229	1f85-m18_A_G12_U13	AAA	AA08	37	0.25	AA08
230	1f85-m19_A_G12_U13	AAA	AA00	55	0.21	AA00
231	1f85-m1_A_G12_U13	AAA	AA00	52	0.17	AA00
232	1f85-m20_A_G12_U13	NAN	NANT	0	0.59	AA05
233	1f85-m2_A_G12_U13	AAA	AA00	52	0.20	AA00
234	1f85-m3_A_G12_U13	AAA	AA00	52	0.20	AA00
235	1f85-m4_A_G12_U13	AAA	AA00	43	0.24	AA00
236	1f85-m5_A_G12_U13	AAw	AA01	49	0.27	AA01
237	1f85-m6_A_G12_U13	AAw	AA01	11	0.35	AA01
238	1f85-m7_A_G12_U13	AAw	AA01	11	0.35	AA01
239	1f85-m8_A_G12_U13	AAA	AA08	28	0.21	AA08
240	1f85-m9_A_G12_U13	AAw	AA01	45	0.24	AA01
241	1f85-m10_A_U13_C14	AAA	AA00	71	0.21	AA00
242	1f85-m11_A_U13_C14	AAA	AA00	16	0.38	AA00
243	1f85-m12_A_U13_C14	AAA	AA00	37	0.34	AA00
244	1f85-m13_A_U13_C14	AAA	AA00	75	0.19	AA00
245	1f85-m14_A_U13_C14	AAA	AA00	74	0.27	AA00
246	1f85-m15_A_U13_C14	NAN	NANT	0	0.38	AA06
247	1f85-m16_A_U13_C14	AAA	AA00	34	0.33	AA00
248	1f85-m17_A_U13_C14	AAA	AA00	60	0.25	AA00
249	1f85-m18_A_U13_C14	AAA	AA00	21	0.36	AA00
250	1f85-m19_A_U13_C14	AAA	AA00	67	0.22	AA00
251	1f85-m1_A_U13_C14	AAA	AA08	61	0.29	AA08
252	1f85-m20_A_U13_C14	NAN	NANT	0	0.64	AA11
253	1f85-m2_A_U13_C14	AAA	AA00	70	0.19	AA00
254	1f85-m3_A_U13_C14	AAA	AA00	70	0.19	AA00
255	1f85-m4_A_U13_C14	AAA	AA00	74	0.22	AA00
256	1f85-m5_A_U13_C14	AAA	AA00	58	0.29	AA00
257	1f85-m6_A_U13_C14	AAA	AA00	18	0.38	AA00
258	1f85-m7_A_U13_C14	AAA	AA00	18	0.38	AA00
259	1f85-m8_A_U13_C14	AAA	AA00	74	0.20	AA00
260	1f85-m9_A_U13_C14	AAA	AA00	48	0.33	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 260 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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