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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Crystal structure of chymotryptic fragment of E. coli ssb bound to two 35-mer single strand DNAS

Results of the assignment of 48 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011eyg_Q_DC3_DC4NANNANT01.08 IC06
021eyg_Q_DC4_DC5NANNANT01.18 BB20
031eyg_Q_DC5_DC6NANNANT01.61 OP24
041eyg_Q_DC6_DC7NANNANT01.49 AB02
051eyg_Q_DC7_DC8NANNANT00.85 AA01
061eyg_Q_DC8_DC9NANNANT01.49 BB2S
071eyg_Q_DC9_DC10NANNANT01.35 OP04
081eyg_Q_DC10_DC11NANNANT01.70 OP30
091eyg_Q_DC11_DC12NANNANT00.81 AA05
101eyg_Q_DC12_DC13NANNANT02.36 OP21
111eyg_Q_DC13_DC14NANNANT00.97 BB10
121eyg_Q_DC14_DC15NANNANT01.91 OP17
131eyg_Q_DC15_DC16AAwAA05410.48 AA05
141eyg_Q_DC16_DC17NANNANT00.84 OP02
151eyg_Q_DC17_DC18NANNANT01.18 AA06
161eyg_Q_DC18_DC19NANNANT01.31 IC04
171eyg_Q_DC19_DC20NANNANT01.13 ZZS1
181eyg_Q_DC20_DC21NANNANT01.73 ZZS2
191eyg_Q_DC21_DC22NANNANT02.43 OP04
201eyg_Q_DC22_DC23NANNANT00.88 OP03
211eyg_Q_DC23_DC24AAAAA03110.68 AA03
221eyg_Q_DC24_DC25NANNANT01.94 OP18
231eyg_Q_DC25_DC26AAwAA05360.43 AA05
241eyg_Q_DC26_DC27NANNANT01.31 IC07
251eyg_Q_DC27_DC28NANNANT01.28 BB02
261eyg_Q_DC28_DC29NANNANT02.23 OP21
271eyg_Q_DC29_DC30NANNANT00.99 BB10
281eyg_R_DC103_DC104NANNANT00.81 AB02
291eyg_R_DC104_DC105NANNANT00.89 AB02
301eyg_R_DC105_DC106NANNANT01.94 AB02
311eyg_R_DC106_DC107NANNANT01.80 AB02
321eyg_R_DC107_DC108NANNANT00.85 AA01
331eyg_R_DC108_DC109NANNANT01.33 IC04
341eyg_R_DC109_DC110NANNANT01.44 OP24
351eyg_R_DC110_DC111NANNANT01.50 OP06
361eyg_R_DC111_DC112NANNANT00.64 BB13
371eyg_R_DC112_DC113NANNANT01.56 IC07
381eyg_R_DC113_DC114NANNANT01.13 AB02
391eyg_R_DC114_DC115NANNANT01.39 OP29
401eyg_R_DC115_DC116NANNANT00.88 AB04
411eyg_R_DC119_DC120NANNANT00.69 AA05
421eyg_R_DC120_DC121NANNANT01.69 AB04
431eyg_R_DC121_DC122NANNANT02.03 OP24
441eyg_R_DC122_DC123NANNANT00.96 OP03
451eyg_R_DC123_DC124NANNANT00.74 AA02
461eyg_R_DC124_DC125NANNANT02.14 OP21
471eyg_R_DC125_DC126NANNANT01.31 IC03
481eyg_R_DC126_DC127NANNANT01.30 OP06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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