DNATCO v4.1: results

CRYSTAL STRUCTURE OF YEAST PHENYLALANINE TRANSFER RNA AT 2.0 A RESOLUTION

Results of the assignment of 71 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1evv_A_G1_C2	NAN	NANT	0	0.82	AA04
02	1evv_A_C2_G3	AAA	AA04	88	0.15	AA04
03	1evv_A_G3_G4	AAA	AA08	72	0.24	AA08
04	1evv_A_G4_A5	AAA	AA00	74	0.19	AA00
05	1evv_A_A5_U6	AAA	AA00	78	0.20	AA00
06	1evv_A_U6_U7	A-B	AB05	79	0.18	AB05
07	1evv_A_U7_U8	OPN	OP11	44	0.50	OP11
08	1evv_A_U8_A9	NAN	NANT	0	0.88	IC02
09	1evv_A_A9_2MG10	NAN	NANT	0	1.12	OP26
10	1evv_A_2MG10_C11	AAA	AA00	27	0.33	AA00
11	1evv_A_C11_U12	AAA	AA00	92	0.19	AA00
12	1evv_A_U12_C13	AAw	AA01	81	0.20	AA01
13	1evv_A_C13_A14	AAw	AA01	20	0.51	AA01
14	1evv_A_A14_G15	AAA	AA08	59	0.55	AA08
15	1evv_A_G15_H2U16	NAN	NANT	0	1.79	IC03
16	1evv_A_H2U16_H2U17	NAN	NANT	0	1.83	OP09
17	1evv_A_H2U17_G18	NAN	NANT	0	1.43	OP09
18	1evv_A_G18_G19	NAN	NANT	0	0.41	IC05
19	1evv_A_G19_G20	NAN	NANT	0	0.59	OP11
20	1evv_A_G20_A21	NAN	NANT	0	2.17	OP03
21	1evv_A_A21_G22	NAN	NANT	0	0.84	AA01
22	1evv_A_G22_A23	AAA	AA00	46	0.27	AA00
23	1evv_A_A23_G24	AAA	AA00	38	0.15	AA00
24	1evv_A_G24_C25	AAA	AA00	83	0.21	AA00
25	1evv_A_C25_M2G26	AAA	AA04	72	0.36	AA04
26	1evv_A_M2G26_C27	AAA	AA00	81	0.23	AA00
27	1evv_A_C27_C28	AAA	AA00	94	0.15	AA00
28	1evv_A_C28_A29	AAA	AA00	86	0.14	AA00
29	1evv_A_A29_G30	AAA	AA00	70	0.18	AA00
30	1evv_A_G30_A31	AAA	AA00	64	0.21	AA00
31	1evv_A_A31_OMC32	AAA	AA00	65	0.31	AA00
32	1evv_A_OMC32_U33	AAA	AA04	39	0.48	AA04
33	1evv_A_U33_OMG34	OPN	OP03	12	0.37	OP03
34	1evv_A_OMG34_A35	NAN	NANT	0	0.48	AA03
35	1evv_A_A35_A36	AAA	AA08	22	0.46	AA08
36	1evv_A_A36_YG37	AAA	AA00	74	0.25	AA00
37	1evv_A_YG37_A38	AAA	AA04	69	0.34	AA04
38	1evv_A_5MC40_U41	NAN	NANT	0	0.43	AA03
39	1evv_A_U41_G42	AAA	AA00	41	0.32	AA00
40	1evv_A_G42_G43	AAA	AA00	80	0.17	AA00
41	1evv_A_G43_A44	AAA	AA00	60	0.26	AA00
42	1evv_A_A44_G45	AAA	AA00	39	0.47	AA00
43	1evv_A_G45_7MG46	ICL	IC01	74	0.28	IC01
44	1evv_A_7MG46_U47	NAN	NANT	0	0.82	OP13
45	1evv_A_U47_C48	NAN	NANT	0	0.93	OP17
46	1evv_A_C48_5MC49	NAN	NANT	0	1.36	OP05
47	1evv_A_5MC49_U50	AAA	AA00	46	0.23	AA00
48	1evv_A_U50_G51	AAA	AA00	17	0.16	AA00
49	1evv_A_G51_U52	AAA	AA00	79	0.16	AA00
50	1evv_A_U52_G53	AAA	AA00	82	0.28	AA00
51	1evv_A_G53_5MU54	AAA	AA00	41	0.25	AA00
52	1evv_A_C56_G57	AAA	AA00	76	0.33	AA00
53	1evv_A_G57_1MA58	ICL	IC01	74	0.41	IC01
54	1evv_A_1MA58_U59	OPN	OP25	65	0.54	OP25
55	1evv_A_U59_C60	A-B	AB05	71	0.41	AB05
56	1evv_A_C60_C61	OPN	OP12	89	0.18	OP12
57	1evv_A_C61_A62	AAA	AA00	70	0.21	AA00
58	1evv_A_A62_C63	AAA	AA00	78	0.11	AA00
59	1evv_A_C63_A64	AAA	AA00	70	0.13	AA00
60	1evv_A_A64_G65	AAA	AA08	74	0.29	AA08
61	1evv_A_G65_A66	AAA	AA00	89	0.18	AA00
62	1evv_A_A66_A67	AAA	AA00	86	0.13	AA00
63	1evv_A_A67_U68	AAA	AA00	88	0.10	AA00
64	1evv_A_U68_U69	AAA	AA00	82	0.25	AA00
65	1evv_A_U69_C70	AAA	AA00	88	0.19	AA00
66	1evv_A_C70_G71	AAA	AA00	86	0.14	AA00
67	1evv_A_G71_C72	AAA	AA04	70	0.35	AA04
68	1evv_A_C72_A73	AAA	AA00	85	0.20	AA00
69	1evv_A_A73_C74	AAA	AA00	80	0.23	AA00
70	1evv_A_C74_C75	AAA	AA04	47	0.55	AA04
71	1evv_A_C75_A76	NAN	NANT	0	1.96	OP22

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 71 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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