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Conformers: ABBIImiBZICOPNSYNN
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GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA MUTANT AND AN ACTIVE SITE INHIBITOR

Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011euy_B_G902_G903AAAAA00830.22 AA00
021euy_B_G903_G904AAAAA00670.26 AA00
031euy_B_G904_G905AAwAA01940.15 AA01
041euy_B_G905_U906AAAAA00740.18 AA00
051euy_B_U906_A907NANNANT00.41 AA01
061euy_B_A907_U908NANNANT00.59 OP11
071euy_B_U908_C909NANNANT01.16 IC04
081euy_B_C909_G910NANNANT01.18 OP07
091euy_B_G910_C911AAAAA00310.30 AA00
101euy_B_C911_C912AAwAA01950.15 AA01
111euy_B_C912_A913AAAAA08290.53 AA08
121euy_B_A913_A914AAwAA1080.62 AA10
131euy_B_A914_G915AAAAA03180.58 AA03
141euy_B_G915_C916NANNANT00.81 OP12
151euy_B_C916_G918NANNANT02.01 OP29
161euy_B_G918_G919NANNANT01.11 AA07
171euy_B_G919_U920NANNANT01.01 AA02
181euy_B_U920_A921NANNANT01.79 OP31
191euy_B_A921_A922NANNANT00.72 IC07
201euy_B_A922_G923AAAAA08680.44 AA08
211euy_B_G923_G924AAAAA00830.11 AA00
221euy_B_G924_C925AAAAA00870.13 AA00
231euy_B_C925_A926AAAAA00780.34 AA00
241euy_B_A926_C927AAAAA00580.41 AA00
251euy_B_C927_C928AAAAA00440.30 AA00
261euy_B_C928_G929AAwAA01810.21 AA01
271euy_B_G929_G930AAAAA00640.21 AA00
281euy_B_G930_A931AAAAA00350.30 AA00
291euy_B_A931_U932AAwAA01850.17 AA01
301euy_B_U932_U933AAAAA08780.33 AA08
311euy_B_U933_C934NANNANT00.65 OP29
321euy_B_C934_U935NANNANT00.68 OP16
331euy_B_U935_G936NANNANT01.41 OP17
341euy_B_G936_A937NANNANT00.50 OP11
351euy_B_A937_U938AAAAA00310.45 AA00
361euy_B_U938_U939AAAAA08480.36 AA08
371euy_B_U939_C940AAAAA08510.46 AA08
381euy_B_C940_C941AAwAA11600.41 AA11
391euy_B_C941_G942AAAAA00510.20 AA00
401euy_B_G942_G943AAAAA00460.30 AA00
411euy_B_G943_C944AAAAA00620.23 AA00
421euy_B_C944_A945NANNANT00.68 AA07
431euy_B_A945_A947NANNANT00.62 AA09
441euy_B_A947_G948NANNANT00.54 AB1S
451euy_B_G948_C949NANNANT01.26 OP06
461euy_B_C949_G950AAAAA00740.17 AA00
471euy_B_G950_A951AAAAA00650.27 AA00
481euy_B_A951_G952AAwAA06940.18 AA06
491euy_B_G952_G953AAAAA08590.34 AA08
501euy_B_G953_U954AAuAA12120.63 AA12
511euy_B_U954_U955AAAAA00250.39 AA00
521euy_B_U955_C956NANNANT00.30 OP04
531euy_B_C956_G957AAAAA08690.33 AA08
541euy_B_G957_A958NANNANT00.59 IC01
551euy_B_A958_A959NANNANT00.54 OP04
561euy_B_A959_U960AAwAA05220.38 AA05
571euy_B_U960_C961NANNANT00.43 OP12
581euy_B_C961_C962AAAAA00910.14 AA00
591euy_B_C962_U963AAAAA00590.29 AA00
601euy_B_U963_C964AAAAA00560.25 AA00
611euy_B_C964_G965AAwAA11790.31 AA11
621euy_B_G965_U966AAAAA08800.25 AA08
631euy_B_U966_A967AAAAA00870.15 AA00
641euy_B_A967_C968AAAAA00750.17 AA00
651euy_B_C968_C969AAAAA00950.13 AA00
661euy_B_C969_C970AAAAA00810.19 AA00
671euy_B_C970_C971AAAAA00890.18 AA00
681euy_B_C971_A972NANNANT00.73 AA12
691euy_B_A972_G973NANNANT00.68 OP31
701euy_B_G973_C974NANNANT01.03 OP25
711euy_B_C974_C975NANNANT01.03 OP31
721euy_B_C975_A976AAAAA08620.40 AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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