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Conformers: ABBIImiBZICOPNSYNN
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CRYSTAL STRUCTURE OF GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA-GLN MUTANT AND AN ACTIVE-SITE INHIBITOR

Results of the assignment of 71 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011euq_B_G902_G903AAAAA08640.26 AA08
021euq_B_G903_G904AAAAA00500.23 AA00
031euq_B_G904_G905AAwAA01840.16 AA01
041euq_B_G905_U906AAAAA08740.13 AA08
051euq_B_U906_A907AAAAA09150.40 AA09
061euq_B_A907_U908NANNANT01.74 OP16
071euq_B_U908_C909NANNANT01.04 IC04
081euq_B_C909_G910NANNANT01.63 OP03
091euq_B_G910_C911NANNANT00.48 AA04
101euq_B_C911_C912AAwAA10650.17 AA10
111euq_B_C912_A913AAAAA08420.47 AA08
121euq_B_A913_A914NANNANT00.62 AA01
131euq_B_A914_G915AAAAA09110.54 AA09
141euq_B_G915_C916NANNANT01.27 AB1S
151euq_B_C916_G918NANNANT02.03 OP29
161euq_B_G918_G919NANNANT01.09 AA07
171euq_B_G919_U920NANNANT00.80 AA07
181euq_B_U920_A921NANNANT01.87 OP31
191euq_B_A921_A922NANNANT00.83 IC07
201euq_B_A922_G923AAAAA08490.47 AA08
211euq_B_G923_G924AAAAA00590.32 AA00
221euq_B_G924_C925AAAAA08800.15 AA08
231euq_B_C925_A926AAAAA00720.32 AA00
241euq_B_A926_C927AAAAA00220.54 AA00
251euq_B_C927_C928AAAAA08610.31 AA08
261euq_B_C928_G929AAwAA01740.28 AA01
271euq_B_G929_G930AAAAA08730.21 AA08
281euq_B_G930_A931AAAAA00210.34 AA00
291euq_B_A931_U932AAwAA01510.28 AA01
301euq_B_U932_U933AAAAA00380.38 AA00
311euq_B_U933_C934NANNANT00.64 OP29
321euq_B_C934_U935NANNANT00.62 OP16
331euq_B_U935_G936NANNANT01.46 OP17
341euq_B_G936_A937NANNANT00.98 OP01
351euq_B_A937_U938AAAAA00110.48 AA00
361euq_B_U938_U939AAAAA08420.45 AA08
371euq_B_U939_C940AAAAA00140.45 AA00
381euq_B_C940_C941AAwAA11640.45 AA11
391euq_B_C941_G942AAAAA08730.16 AA08
401euq_B_G942_G943AAAAA00600.14 AA00
411euq_B_G943_C944NANNANT01.08 BB10
421euq_B_C944_A945NANNANT00.94 IC02
431euq_B_A945_G948NANNANT02.08 OP30
441euq_B_G948_C949NANNANT01.45 OP06
451euq_B_C949_G950AAAAA00230.27 AA00
461euq_B_G950_A951AAAAA00490.26 AA00
471euq_B_A951_G952AAwAA01870.24 AA01
481euq_B_G952_G953AAAAA08820.18 AA08
491euq_B_G953_U954AAAAA00430.32 AA00
501euq_B_U954_U955NANNANT00.41 AB04
511euq_B_U955_C956NANNANT00.41 OP04
521euq_B_C956_G957AAAAA08670.20 AA08
531euq_B_G957_A958NANNANT00.70 IC01
541euq_B_A958_A959NANNANT00.67 OP04
551euq_B_A959_U960NANNANT00.43 AA05
561euq_B_U960_C961NANNANT00.50 OP12
571euq_B_C961_C962AAAAA08620.29 AA08
581euq_B_C962_U963AAAAA00840.21 AA00
591euq_B_U963_C964AAAAA08580.41 AA08
601euq_B_C964_G965AAwAA06590.56 AA06
611euq_B_G965_U966AAAAA00670.25 AA00
621euq_B_U966_A967AAAAA08810.20 AA08
631euq_B_A967_C968AAAAA08790.31 AA08
641euq_B_C968_C969AAAAA00560.35 AA00
651euq_B_C969_C970AAAAA00650.28 AA00
661euq_B_C970_C971AAAAA00390.24 AA00
671euq_B_C971_A972NANNANT00.62 AA12
681euq_B_A972_G973NANNANT00.72 OP31
691euq_B_G973_C974NANNANT01.06 OP25
701euq_B_C974_C975NANNANT01.13 OP31
711euq_B_C975_A976AAAAA08690.36 AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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