DNATCO v4.1: results

The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution

Results of the assignment of 71 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1ehz_A_G1_C2	AAA	AA00	90	0.17	AA00
02	1ehz_A_C2_G3	AAA	AA00	91	0.16	AA00
03	1ehz_A_G3_G4	AAA	AA00	83	0.17	AA00
04	1ehz_A_G4_A5	AAA	AA00	73	0.21	AA00
05	1ehz_A_A5_U6	AAA	AA08	92	0.16	AA08
06	1ehz_A_U6_U7	A-B	AB05	71	0.20	AB05
07	1ehz_A_U7_U8	OPN	OP11	52	0.46	OP11
08	1ehz_A_U8_A9	NAN	NANT	0	0.90	IC02
09	1ehz_A_A9_2MG10	NAN	NANT	0	1.12	OP26
10	1ehz_A_2MG10_C11	AAA	AA08	37	0.32	AA08
11	1ehz_A_C11_U12	AAA	AA00	96	0.17	AA00
12	1ehz_A_U12_C13	AAw	AA01	88	0.19	AA01
13	1ehz_A_C13_A14	NAN	NANT	0	0.56	AA06
14	1ehz_A_A14_G15	AAA	AA08	36	0.55	AA08
15	1ehz_A_G15_H2U16	NAN	NANT	0	0.93	AA09
16	1ehz_A_H2U16_H2U17	NAN	NANT	0	0.91	OP17
17	1ehz_A_H2U17_G18	NAN	NANT	0	1.70	OP21
18	1ehz_A_G18_G19	ICL	IC05	69	0.33	IC05
19	1ehz_A_G19_G20	NAN	NANT	0	0.66	OP11
20	1ehz_A_G20_A21	NAN	NANT	0	1.39	OP17
21	1ehz_A_A21_G22	ICL	IC07	7	0.58	IC07
22	1ehz_A_G22_A23	AAA	AA00	53	0.25	AA00
23	1ehz_A_A23_G24	AAA	AA00	88	0.14	AA00
24	1ehz_A_G24_C25	AAA	AA00	92	0.15	AA00
25	1ehz_A_C25_M2G26	AAA	AA00	61	0.37	AA00
26	1ehz_A_M2G26_C27	AAA	AA08	78	0.16	AA08
27	1ehz_A_C27_C28	AAA	AA00	86	0.20	AA00
28	1ehz_A_C28_A29	AAA	AA00	95	0.16	AA00
29	1ehz_A_A29_G30	AAA	AA00	79	0.21	AA00
30	1ehz_A_G30_A31	AAA	AA00	64	0.33	AA00
31	1ehz_A_A31_OMC32	AAA	AA08	80	0.18	AA08
32	1ehz_A_OMC32_U33	AAA	AA00	73	0.26	AA00
33	1ehz_A_U33_OMG34	OPN	OP04	46	0.18	OP04
34	1ehz_A_OMG34_A35	AAA	AA08	79	0.24	AA08
35	1ehz_A_A35_A36	AAA	AA00	58	0.46	AA00
36	1ehz_A_A36_YYG37	AAA	AA00	62	0.27	AA00
37	1ehz_A_YYG37_A38	AAA	AA00	35	0.34	AA00
38	1ehz_A_5MC40_U41	AAA	AA00	80	0.21	AA00
39	1ehz_A_U41_G42	AAA	AA08	92	0.18	AA08
40	1ehz_A_G42_G43	AAA	AA00	90	0.15	AA00
41	1ehz_A_G43_A44	AAA	AA00	81	0.20	AA00
42	1ehz_A_A44_G45	AAA	AA00	43	0.44	AA00
43	1ehz_A_G45_7MG46	ICL	IC01	86	0.24	IC01
44	1ehz_A_7MG46_U47	NAN	NANT	0	0.84	OP13
45	1ehz_A_U47_C48	NAN	NANT	0	0.94	OP17
46	1ehz_A_C48_5MC49	NAN	NANT	0	1.36	OP05
47	1ehz_A_5MC49_U50	AAA	AA00	54	0.24	AA00
48	1ehz_A_U50_G51	AAA	AA00	96	0.13	AA00
49	1ehz_A_G51_U52	AAA	AA00	90	0.13	AA00
50	1ehz_A_U52_G53	AAA	AA00	87	0.27	AA00
51	1ehz_A_G53_5MU54	AAA	AA00	70	0.21	AA00
52	1ehz_A_C56_G57	AAA	AA00	66	0.34	AA00
53	1ehz_A_G57_1MA58	ICL	IC01	74	0.39	IC01
54	1ehz_A_1MA58_U59	OPN	OP25	64	0.58	OP25
55	1ehz_A_U59_C60	A-B	AB05	75	0.43	AB05
56	1ehz_A_C60_C61	OPN	OP12	93	0.19	OP12
57	1ehz_A_C61_A62	AAA	AA00	78	0.20	AA00
58	1ehz_A_A62_C63	AAA	AA00	91	0.13	AA00
59	1ehz_A_C63_A64	AAA	AA00	85	0.14	AA00
60	1ehz_A_A64_G65	AAA	AA08	72	0.28	AA08
61	1ehz_A_G65_A66	AAA	AA00	81	0.22	AA00
62	1ehz_A_A66_A67	AAA	AA00	82	0.18	AA00
63	1ehz_A_A67_U68	AAA	AA00	90	0.13	AA00
64	1ehz_A_U68_U69	AAA	AA00	86	0.23	AA00
65	1ehz_A_U69_C70	AAA	AA00	69	0.26	AA00
66	1ehz_A_C70_G71	AAA	AA00	80	0.13	AA00
67	1ehz_A_G71_C72	AAA	AA00	93	0.15	AA00
68	1ehz_A_C72_A73	AAA	AA00	91	0.20	AA00
69	1ehz_A_A73_C74	AAA	AA00	78	0.26	AA00
70	1ehz_A_C74_C75	AAA	AA00	25	0.50	AA00
71	1ehz_A_C75_A76	NAN	NANT	0	1.50	OP06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 71 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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