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Conformers: ABBIImiBZICOPNSYNN
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The crystal structure of E. coli MutS binding to DNA with a G:T mismatch

Results of the assignment of 33 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011e3m_E_DA1_DG2BBBBB00310.42 BB00
021e3m_E_DG2_DC3BBwBB03660.38 BB03
031e3m_E_DC3_DT4BBwBB02250.41 BB02
041e3m_E_DT4_DG5NANNANT00.45 BB15
051e3m_E_DG5_DC6BB2BB07560.33 BB07
061e3m_E_DC6_DC7BBBBB01690.29 BB01
071e3m_E_DC7_DA8BBBBB01370.28 BB01
081e3m_E_DA8_DG9NANNANT00.74 AB03
091e3m_E_DG9_DG10B-ABA16820.21 BA16
101e3m_E_DG10_DC11NANNANT00.46 AB04
111e3m_E_DC11_DA12BBBBB00280.27 BB00
121e3m_E_DA12_DC13BBBBB00920.15 BB00
131e3m_E_DC13_DC14miBBB15470.33 BB15
141e3m_E_DC14_DA15BBBBB00690.38 BB00
151e3m_E_DA15_DG16BBBBB00650.17 BB00
161e3m_E_DG16_DT17miBBB13690.24 BB13
171e3m_E_DT17_DG18BBwBB03500.30 BB03
181e3m_F_DA14_DC15BBwBB03540.21 BB03
191e3m_F_DC15_DT16BBwBB02230.36 BB02
201e3m_F_DT16_DG17BBBBB00510.36 BB00
211e3m_F_DG17_DG18B-ABA08780.23 BA08
221e3m_F_DG18_DT19AAAAA00520.26 AA00
231e3m_F_DT19_DG20AAAAA00190.30 AA00
241e3m_F_DG20_DC21NANNANT00.69 AB02
251e3m_F_DC21_DT22NANNANT00.73 AA02
261e3m_F_DT22_DT23NANNANT00.39 IC06
271e3m_F_DT23_DG24BBBBB00680.27 BB00
281e3m_F_DG24_DG25BBBBB00860.13 BB00
291e3m_F_DG25_DC26BBBBB00880.20 BB00
301e3m_F_DC26_DA27BB2BB07910.25 BB07
311e3m_F_DA27_DG28BBBBB00740.27 BB00
321e3m_F_DG28_DC29B12BB05210.34 BB05
331e3m_F_DC29_DT30BBwBB03100.30 BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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