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Conformers: ABBIImiBZICOPNSYNN
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CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA

Results of the assignment of 18 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011d02_C_DG1_DC2BBBBB00750.21 BB00
021d02_C_DC2_DC3BBBBB00760.29 BB00
031d02_C_DC3_DA4BBBBB00800.27 BB00
041d02_C_DA4_DA5BBBBB00190.62 BB00
051d02_C_DA5_DT6NANNANT00.58 BA17
061d02_C_DT6_DT7A-BAB01600.17 AB01
071d02_C_DT7_DG8BBBBB00870.20 BB00
081d02_C_DG8_DG9BBBBB00750.31 BB00
091d02_C_DG9_DC10BBBBB00950.14 BB00
101d02_D_DG1_DC2BBBBB01850.20 BB01
111d02_D_DC2_DC3BBBBB00480.33 BB00
121d02_D_DC3_DA4BBBBB00770.27 BB00
131d02_D_DA4_DA5BBBBB00100.65 BB00
141d02_D_DA5_DT6NANNANT00.58 BA17
151d02_D_DT6_DT7A-BAB01610.16 AB01
161d02_D_DT7_DG8BBBBB00820.23 BB00
171d02_D_DG8_DG9BBBBB00930.13 BB00
181d02_D_DG9_DC10BBBBB00280.49 BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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