DNATCO v4.1: results

CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE

Results of the assignment of 58 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1cgp_C_DG16_DC17	NAN	NANT	0	0.52	BA17
02	1cgp_C_DC17_DG18	NAN	NANT	0	0.58	BB10
03	1cgp_C_DG18_DA19	NAN	NANT	0	0.85	BB17
04	1cgp_C_DA19_DA20	BBB	BB00	57	0.22	BB00
05	1cgp_C_DA20_DA21	NAN	NANT	0	0.47	BB10
06	1cgp_C_DA21_DA22	NAN	NANT	0	0.56	AA02
07	1cgp_C_DA22_DG23	BBB	BB01	19	0.19	BB01
08	1cgp_C_DG23_DT24	B-A	BA05	65	0.27	BA05
09	1cgp_C_DT24_DG25	A-B	AB01	31	0.21	AB01
10	1cgp_C_DG25_DT26	NAN	NANT	0	0.60	BB17
11	1cgp_C_DT26_DG27	A-B	AB05	36	0.42	AB05
12	1cgp_C_DG27_DA28	BBB	BB00	41	0.40	BB00
13	1cgp_C_DA28_DC29	B-A	BA01	36	0.28	BA01
14	1cgp_C_DC29_DA30	NAN	NANT	0	0.61	BB10
15	1cgp_C_DA30_DT31	NAN	NANT	0	0.63	AB03
16	1cgp_C_DT31_DA32	NAN	NANT	0	0.47	BB07
17	1cgp_C_DA32_DT33	BBB	BB00	65	0.33	BB00
18	1cgp_D_DG3_DT4	AAA	AA00	19	0.35	AA00
19	1cgp_D_DT4_DC5	AAA	AA09	47	0.29	AA09
20	1cgp_D_DC5_DA6	A-B	AB01	21	0.37	AB01
21	1cgp_D_DA6_DC7	B-A	BA01	34	0.23	BA01
22	1cgp_D_DC7_DA8	A-B	AB01	40	0.46	AB01
23	1cgp_D_DA8_DC9	B-A	BA01	50	0.22	BA01
24	1cgp_D_DC9_DT10	NAN	NANT	0	0.45	AB02
25	1cgp_D_DT10_DT11	NAN	NANT	0	0.56	AA08
26	1cgp_D_DT11_DT12	NAN	NANT	0	0.48	AB04
27	1cgp_D_DT12_DT13	NAN	NANT	0	0.50	AB02
28	1cgp_D_DT13_DC14	AAA	AA02	28	0.50	AA02
29	1cgp_D_DC14_DG15	A-B	AB02	32	0.41	AB02
30	1cgp_E_DG16_DC17	NAN	NANT	0	1.51	ZZ02
31	1cgp_E_DC17_DG18	NAN	NANT	0	0.58	AA02
32	1cgp_E_DG18_DA19	NAN	NANT	0	0.51	BB10
33	1cgp_E_DA19_DA20	NAN	NANT	0	0.37	AB01
34	1cgp_E_DA20_DA21	BBB	BB00	56	0.23	BB00
35	1cgp_E_DA21_DA22	miB	BB10	39	0.28	BB10
36	1cgp_E_DA22_DG23	B-A	BA05	47	0.39	BA05
37	1cgp_E_DG23_DT24	NAN	NANT	0	0.54	AA04
38	1cgp_E_DT24_DG25	NAN	NANT	0	0.49	AB04
39	1cgp_E_DG25_DT26	NAN	NANT	0	0.49	BB10
40	1cgp_E_DT26_DG27	NAN	NANT	0	0.63	AB04
41	1cgp_E_DG27_DA28	NAN	NANT	0	0.46	BB10
42	1cgp_E_DA28_DC29	B-A	BA05	44	0.36	BA05
43	1cgp_E_DC29_DA30	A-B	AB01	49	0.27	AB01
44	1cgp_E_DA30_DT31	B-A	BA01	17	0.40	BA01
45	1cgp_E_DT31_DA32	NAN	NANT	0	0.50	AB02
46	1cgp_E_DA32_DT33	BBB	BB00	69	0.28	BB00
47	1cgp_F_DG3_DT4	AAA	AA00	26	0.32	AA00
48	1cgp_F_DT4_DC5	AAA	AA02	75	0.24	AA02
49	1cgp_F_DC5_DA6	NAN	NANT	0	0.45	AA02
50	1cgp_F_DA6_DC7	BBB	BB00	19	0.31	BB00
51	1cgp_F_DC7_DA8	B12	BB04	50	0.23	BB04
52	1cgp_F_DA8_DC9	BBB	BB01	64	0.23	BB01
53	1cgp_F_DC9_DT10	BBB	BB00	44	0.30	BB00
54	1cgp_F_DT10_DT11	NAN	NANT	0	0.35	BB10
55	1cgp_F_DT11_DT12	NAN	NANT	0	0.49	AB01
56	1cgp_F_DT12_DT13	BBB	BB00	21	0.29	BB00
57	1cgp_F_DT13_DC14	NAN	NANT	0	0.42	BB17
58	1cgp_F_DC14_DG15	NAN	NANT	0	0.39	AB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 58 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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