DNATCO v4.1: results

STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA

Results of the assignment of 57 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1by4_E_DT1495_DA1496	NAN	NANT	0	0.81	BB03
02	1by4_E_DA1496_DG1497	NAN	NANT	0	0.62	BB02
03	1by4_E_DG1497_DG1498	B12	BB05	76	0.21	BB05
04	1by4_E_DG1498_DT1499	BBB	BB00	24	0.36	BB00
05	1by4_E_DT1499_DC1500	NAN	NANT	0	0.45	BB10
06	1by4_E_DC1500_DA1501	NAN	NANT	0	0.66	BB08
07	1by4_E_DA1501_DA1502	B12	BB04	28	0.58	BB04
08	1by4_E_DA1502_DA1503	miB	BB10	49	0.30	BB10
09	1by4_E_DA1503_DG1504	NAN	NANT	0	0.42	BA01
10	1by4_E_DG1504_DG1505	AAA	AA00	30	0.33	AA00
11	1by4_E_DG1505_DT1506	NAN	NANT	0	0.55	AB03
12	1by4_E_DT1506_DC1507	miB	BB15	38	0.41	BB15
13	1by4_E_DC1507_DA1508	NAN	NANT	0	0.65	BB08
14	1by4_E_DA1508_DG1509	BBw	BB02	24	0.25	BB02
15	1by4_F_DC1531_DT1532	BBw	BB02	53	0.56	BB02
16	1by4_F_DT1532_DG1533	BBB	BB00	44	0.46	BB00
17	1by4_F_DG1533_DA1534	BB2	BB07	73	0.31	BB07
18	1by4_F_DA1534_DC1535	BBw	BB02	39	0.31	BB02
19	1by4_F_DC1535_DC1536	BBw	BB17	53	0.31	BB17
20	1by4_F_DC1536_DT1537	BBB	BB00	44	0.46	BB00
21	1by4_F_DT1537_DT1538	BBw	BB02	66	0.21	BB02
22	1by4_F_DT1538_DT1539	BBB	BB00	45	0.25	BB00
23	1by4_F_DT1539_DG1540	NAN	NANT	0	0.42	BB02
24	1by4_F_DG1540_DA1541	NAN	NANT	0	0.30	BB07
25	1by4_F_DA1541_DC1542	BBw	BB02	81	0.19	BB02
26	1by4_F_DC1542_DC1543	miB	BB15	68	0.22	BB15
27	1by4_F_DC1543_DT1544	BBB	BB00	72	0.24	BB00
28	1by4_F_DT1544_DA1545	BBB	BB00	41	0.36	BB00
29	1by4_G_DC2494_DT2495	NAN	NANT	0	0.95	BB03
30	1by4_G_DT2495_DA2496	NAN	NANT	0	0.80	BB02
31	1by4_G_DA2496_DG2497	NAN	NANT	0	0.92	BB11
32	1by4_G_DG2497_DG2498	BBw	BB11	45	0.30	BB11
33	1by4_G_DG2498_DT2499	NAN	NANT	0	0.64	BB02
34	1by4_G_DT2499_DC2500	NAN	NANT	0	0.67	BB07
35	1by4_G_DC2500_DA2501	NAN	NANT	0	0.45	BB08
36	1by4_G_DA2501_DA2502	BBB	BB00	18	0.49	BB00
37	1by4_G_DA2502_DA2503	miB	BB10	20	0.39	BB10
38	1by4_G_DA2503_DG2504	NAN	NANT	0	0.43	BA08
39	1by4_G_DG2504_DG2505	A-B	AB01	61	0.31	AB01
40	1by4_G_DG2505_DT2506	NAN	NANT	0	0.42	BB02
41	1by4_G_DT2506_DC2507	NAN	NANT	0	0.50	BB10
42	1by4_G_DC2507_DA2508	NAN	NANT	0	0.50	BB08
43	1by4_G_DA2508_DG2509	BBw	BB02	42	0.35	BB02
44	1by4_H_DC2531_DT2532	BBB	BB01	60	0.43	BB01
45	1by4_H_DT2532_DG2533	BBB	BB00	55	0.39	BB00
46	1by4_H_DG2533_DA2534	BB2	BB07	72	0.24	BB07
47	1by4_H_DA2534_DC2535	NAN	NANT	0	0.44	BB05
48	1by4_H_DC2535_DC2536	NAN	NANT	0	0.61	BB02
49	1by4_H_DC2536_DT2537	BBw	BB03	31	0.45	BB03
50	1by4_H_DT2537_DT2538	BBw	BB02	46	0.34	BB02
51	1by4_H_DT2538_DT2539	BBB	BB00	63	0.27	BB00
52	1by4_H_DT2539_DG2540	BBB	BB00	75	0.29	BB00
53	1by4_H_DG2540_DA2541	BB2	BB07	63	0.35	BB07
54	1by4_H_DA2541_DC2542	B-A	BA01	67	0.27	BA01
55	1by4_H_DC2542_DC2543	NAN	NANT	0	0.36	BB15
56	1by4_H_DC2543_DT2544	B12	BB04	76	0.28	BB04
57	1by4_H_DT2544_DA2545	miB	BB10	46	0.36	BB10

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 57 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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