Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
SXL-LETHAL PROTEIN/RNA COMPLEX
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 22 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 1b7f_P_G1_U2 | NAN | NANT | 0 | 1.36 |
| 02 | 1b7f_P_U2_U3 | NAN | NANT | 0 | 1.31 |
| 03 | 1b7f_P_U3_G4 | OPN | OP20 | 19 | 0.78 |
| 04 | 1b7f_P_G4_U5 | OPN | OP22 | 35 | 0.52 |
| 05 | 1b7f_P_U5_U6 | NAN | NANT | 0 | 1.34 |
| 06 | 1b7f_P_U6_U7 | NAN | NANT | 0 | 1.21 |
| 07 | 1b7f_P_U7_U8 | AAA | AA08 | 32 | 0.32 |
| 08 | 1b7f_P_U8_U9 | NAN | NANT | 0 | 0.65 |
| 09 | 1b7f_P_U9_U10 | NAN | NANT | 0 | 0.63 |
| 10 | 1b7f_P_U10_U11 | NAN | NANT | 0 | 0.80 |
| 11 | 1b7f_P_U11_U12 | NAN | NANT | 0 | 2.38 |
| 12 | 1b7f_Q_G1_U2 | NAN | NANT | 0 | 1.99 |
| 13 | 1b7f_Q_U2_U3 | NAN | NANT | 0 | 1.85 |
| 14 | 1b7f_Q_U3_G4 | NAN | NANT | 0 | 1.66 |
| 15 | 1b7f_Q_G4_U5 | OPN | OP22 | 13 | 0.70 |
| 16 | 1b7f_Q_U5_U6 | NAN | NANT | 0 | 1.35 |
| 17 | 1b7f_Q_U6_U7 | NAN | NANT | 0 | 1.33 |
| 18 | 1b7f_Q_U7_U8 | AAA | AA00 | 20 | 0.38 |
| 19 | 1b7f_Q_U8_U9 | NAN | NANT | 0 | 0.60 |
| 20 | 1b7f_Q_U9_U10 | NAN | NANT | 0 | 0.62 |
| 21 | 1b7f_Q_U10_U11 | NAN | NANT | 0 | 0.80 |
| 22 | 1b7f_Q_U11_U12 | NAN | NANT | 0 | 2.85 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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