DNATCO v4.1: results

CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASP

Results of the assignment of 136 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1asy_R_U601_C602	AAA	AA08	77	0.22	AA08
002	1asy_R_C602_C603	AAA	AA08	91	0.14	AA08
003	1asy_R_C603_G604	AAA	AA00	66	0.18	AA00
004	1asy_R_G604_U605	AAA	AA08	80	0.18	AA08
005	1asy_R_U605_G606	AAA	AA04	55	0.26	AA04
006	1asy_R_G606_A607	A-B	AB05	69	0.26	AB05
007	1asy_R_A607_U608	OPN	OP11	26	0.54	OP11
008	1asy_R_U608_A609	NAN	NANT	0	1.09	IC04
009	1asy_R_A609_G610	NAN	NANT	0	1.61	IC07
010	1asy_R_G610_U611	AAA	AA08	51	0.21	AA08
011	1asy_R_U611_U612	AAA	AA03	61	0.27	AA03
012	1asy_R_A614_A615	AAA	AA04	59	0.30	AA04
013	1asy_R_A615_H2U616	NAN	NANT	0	0.42	AA02
014	1asy_R_H2U616_G617	NAN	NANT	0	1.52	IC03
015	1asy_R_G617_G618	NAN	NANT	0	0.97	BB10
016	1asy_R_G618_H2U619	NAN	NANT	0	1.40	AB1S
017	1asy_R_H2U619_C620	NAN	NANT	0	1.31	ZZS1
018	1asy_R_C620_A621	NAN	NANT	0	0.22	OP29
019	1asy_R_A621_G622	AAu	AA13	73	0.28	AA13
020	1asy_R_G622_A623	AAw	AA01	76	0.16	AA01
021	1asy_R_A623_A624	AAA	AA00	55	0.20	AA00
022	1asy_R_A624_U625	AAA	AA00	14	0.26	AA00
023	1asy_R_U625_G626	AAA	AA04	88	0.15	AA04
024	1asy_R_G626_G627	AAA	AA00	48	0.22	AA00
025	1asy_R_G627_G628	AAA	AA00	33	0.25	AA00
026	1asy_R_G628_C629	NAN	NANT	0	0.44	AA02
027	1asy_R_C629_G630	NAN	NANT	0	0.32	AA01
028	1asy_R_G630_C631	AAA	AA08	73	0.19	AA08
029	1asy_R_U633_G634	NAN	NANT	0	0.72	IC07
030	1asy_R_G634_U635	NAN	NANT	0	1.21	BB01
031	1asy_R_U635_C636	NAN	NANT	0	0.49	AA04
032	1asy_R_C636_1MG637	NAN	NANT	0	1.09	OP30
033	1asy_R_1MG637_C638	NAN	NANT	0	0.58	OP17
034	1asy_R_C638_G639	AAA	AA00	49	0.34	AA00
035	1asy_R_G639_U640	AAA	AA00	76	0.23	AA00
036	1asy_R_U640_G641	AAu	AA12	56	0.32	AA12
037	1asy_R_G641_C642	NAN	NANT	0	0.35	AA10
038	1asy_R_C642_C643	AAA	AA00	64	0.23	AA00
039	1asy_R_C643_A644	AAA	AA00	63	0.19	AA00
040	1asy_R_A644_G645	AAA	AA09	50	0.48	AA09
041	1asy_R_G645_A646	NAN	NANT	0	0.48	IC01
042	1asy_R_A646_U648	NAN	NANT	0	0.66	BB13
043	1asy_R_U648_5MC649	NAN	NANT	0	1.36	OP05
044	1asy_R_5MC649_G650	AAA	AA04	57	0.36	AA04
045	1asy_R_G650_G651	AAA	AA00	61	0.26	AA00
046	1asy_R_G651_G652	AAA	AA04	76	0.16	AA04
047	1asy_R_G652_G653	AAA	AA08	76	0.18	AA08
048	1asy_R_G653_5MU654	AAA	AA08	64	0.21	AA08
049	1asy_R_C656_A657	AAA	AA00	17	0.51	AA00
050	1asy_R_A657_A658	NAN	NANT	0	0.55	IC03
051	1asy_R_A658_U659	NAN	NANT	0	0.69	OP04
052	1asy_R_U659_U660	A-B	AB01	17	0.47	AB01
053	1asy_R_U660_C661	NAN	NANT	0	0.32	OP12
054	1asy_R_C661_C662	AAA	AA08	58	0.30	AA08
055	1asy_R_C662_C663	AAA	AA00	77	0.15	AA00
056	1asy_R_C663_C664	AAA	AA00	95	0.21	AA00
057	1asy_R_C664_G665	AAA	AA00	70	0.20	AA00
058	1asy_R_G665_U666	AAA	AA08	84	0.17	AA08
059	1asy_R_U666_C667	AAA	AA08	71	0.20	AA08
060	1asy_R_C667_G668	AAA	AA00	54	0.22	AA00
061	1asy_R_G668_C669	AAA	AA00	66	0.21	AA00
062	1asy_R_C669_G670	AAA	AA00	79	0.12	AA00
063	1asy_R_G670_G671	AAA	AA04	86	0.18	AA04
064	1asy_R_G671_A672	AAA	AA08	45	0.26	AA08
065	1asy_R_A672_G673	AAA	AA08	48	0.34	AA08
066	1asy_R_G673_C674	AAA	AA00	35	0.33	AA00
067	1asy_R_C674_C675	AAw	AA10	24	0.34	AA10
068	1asy_R_C675_A676	NAN	NANT	0	0.86	OP04
069	1asy_S_U601_C602	AAA	AA00	47	0.17	AA00
070	1asy_S_C602_C603	AAA	AA00	85	0.16	AA00
071	1asy_S_C603_G604	AAA	AA08	69	0.24	AA08
072	1asy_S_G604_U605	AAA	AA08	77	0.25	AA08
073	1asy_S_U605_G606	AAw	AA06	89	0.15	AA06
074	1asy_S_G606_A607	A-B	AB05	55	0.19	AB05
075	1asy_S_A607_U608	OPN	OP11	77	0.30	OP11
076	1asy_S_U608_A609	NAN	NANT	0	0.49	IC07
077	1asy_S_A609_G610	NAN	NANT	0	1.24	OP12
078	1asy_S_G610_U611	AAA	AA04	60	0.30	AA04
079	1asy_S_U611_U612	AAA	AA08	54	0.28	AA08
080	1asy_S_A614_A615	AAA	AA04	60	0.32	AA04
081	1asy_S_A615_H2U616	AAA	AA08	49	0.37	AA08
082	1asy_S_H2U616_G617	NAN	NANT	0	1.31	IC03
083	1asy_S_G617_G618	NAN	NANT	0	0.88	BB11
084	1asy_S_G618_H2U619	NAN	NANT	0	1.91	AB04
085	1asy_S_H2U619_C620	NAN	NANT	0	1.68	OP13
086	1asy_S_C620_A621	OPN	OP06	34	0.49	OP06
087	1asy_S_A621_G622	NAN	NANT	0	0.61	AA12
088	1asy_S_G622_A623	AAA	AA04	64	0.29	AA04
089	1asy_S_A623_A624	AAA	AA08	89	0.17	AA08
090	1asy_S_A624_U625	AAA	AA00	83	0.24	AA00
091	1asy_S_U625_G626	AAA	AA00	63	0.23	AA00
092	1asy_S_G626_G627	AAA	AA08	36	0.22	AA08
093	1asy_S_G627_G628	AAA	AA08	51	0.24	AA08
094	1asy_S_G628_C629	NAN	NANT	0	0.31	AA00
095	1asy_S_C629_G630	NAN	NANT	0	0.21	AA01
096	1asy_S_G630_C631	AAA	AA03	79	0.23	AA03
097	1asy_S_U633_G634	NAN	NANT	0	0.99	OP02
098	1asy_S_G634_U635	NAN	NANT	0	1.42	AA04
099	1asy_S_U635_C636	AAA	AA00	53	0.39	AA00
100	1asy_S_C636_1MG637	NAN	NANT	0	1.12	OP30
101	1asy_S_1MG637_C638	NAN	NANT	0	0.52	OP17
102	1asy_S_C638_G639	NAN	NANT	0	0.46	AA09
103	1asy_S_G639_U640	AAA	AA04	72	0.21	AA04
104	1asy_S_U640_G641	AAu	AA12	49	0.32	AA12
105	1asy_S_G641_C642	AAA	AA08	81	0.20	AA08
106	1asy_S_C642_C643	AAA	AA00	86	0.22	AA00
107	1asy_S_C643_A644	AAA	AA00	61	0.19	AA00
108	1asy_S_A644_G645	AAA	AA00	40	0.35	AA00
109	1asy_S_G645_A646	NAN	NANT	0	0.95	AA07
110	1asy_S_A646_U648	NAN	NANT	0	0.61	IC04
111	1asy_S_U648_5MC649	NAN	NANT	0	1.37	OP06
112	1asy_S_5MC649_G650	AAA	AA00	70	0.18	AA00
113	1asy_S_G650_G651	AAA	AA00	90	0.10	AA00
114	1asy_S_G651_G652	AAA	AA04	85	0.16	AA04
115	1asy_S_G652_G653	AAA	AA00	76	0.23	AA00
116	1asy_S_G653_5MU654	AAA	AA00	55	0.20	AA00
117	1asy_S_C656_A657	AAA	AA00	46	0.34	AA00
118	1asy_S_A657_A658	NAN	NANT	0	0.55	IC03
119	1asy_S_A658_U659	OPN	OP25	88	0.18	OP25
120	1asy_S_U659_U660	A-B	AB05	62	0.40	AB05
121	1asy_S_U660_C661	NAN	NANT	0	0.25	OP12
122	1asy_S_C661_C662	AAA	AA00	44	0.28	AA00
123	1asy_S_C662_C663	AAw	AA01	57	0.25	AA01
124	1asy_S_C663_C664	AAA	AA08	65	0.25	AA08
125	1asy_S_C664_G665	AAA	AA00	76	0.17	AA00
126	1asy_S_G665_U666	AAA	AA08	77	0.19	AA08
127	1asy_S_U666_C667	AAA	AA08	78	0.17	AA08
128	1asy_S_C667_G668	AAA	AA00	30	0.21	AA00
129	1asy_S_G668_C669	AAA	AA08	75	0.22	AA08
130	1asy_S_C669_G670	AAA	AA08	73	0.24	AA08
131	1asy_S_G670_G671	AAA	AA08	87	0.12	AA08
132	1asy_S_G671_A672	AAA	AA00	84	0.19	AA00
133	1asy_S_A672_G673	AAA	AA00	70	0.22	AA00
134	1asy_S_G673_C674	AAA	AA00	68	0.24	AA00
135	1asy_S_C674_C675	AAA	AA08	18	0.65	AA08
136	1asy_S_C675_A676	NAN	NANT	0	1.63	OP06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 136 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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