DNATCO v4.1: results

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Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1aq4_R_A3_U4	AAA	AA08	87	0.14	AA08
02	1aq4_R_U4_G5	AAA	AA00	58	0.27	AA00
03	1aq4_R_G5_A6	NAN	NANT	0	0.93	OP29
04	1aq4_R_A6_G7	NAN	NANT	0	0.83	OP31
05	1aq4_R_G7_G8	AAA	AA08	61	0.25	AA08
06	1aq4_R_G8_A9	AAA	AA00	36	0.29	AA00
07	1aq4_R_A9_U10	OPN	OP09	21	0.36	OP09
08	1aq4_R_U10_U11	OPN	OP20	37	0.32	OP20
09	1aq4_R_U11_A12	NAN	NANT	0	1.40	OP22
10	1aq4_R_A12_C13	NAN	NANT	0	0.53	OP27
11	1aq4_R_C13_C14	AAA	AA00	77	0.12	AA00
12	1aq4_R_C14_C15	AAA	AA00	79	0.24	AA00
13	1aq4_R_C15_A16	AAA	AA08	95	0.15	AA08
14	1aq4_R_A16_U17	AAA	AA08	83	0.23	AA08
15	1aq4_R_U17_G18	AAA	AA03	70	0.29	AA03
16	1aq4_S_A3_U4	AAA	AA08	86	0.22	AA08
17	1aq4_S_U4_G5	AAA	AA00	62	0.23	AA00
18	1aq4_S_G5_A6	NAN	NANT	0	0.89	OP29
19	1aq4_S_A6_G7	NAN	NANT	0	0.82	OP31
20	1aq4_S_G7_G8	AAA	AA00	43	0.30	AA00
21	1aq4_S_G8_A9	AAA	AA00	54	0.35	AA00
22	1aq4_S_A9_U10	OPN	OP09	44	0.34	OP09
23	1aq4_S_U10_U11	NAN	NANT	0	0.40	OP20
24	1aq4_S_U11_A12	NAN	NANT	0	0.58	OP16
25	1aq4_S_A12_C13	NAN	NANT	0	0.52	OP27
26	1aq4_S_C13_C14	AAA	AA00	79	0.18	AA00
27	1aq4_S_C14_C15	AAA	AA00	69	0.37	AA00
28	1aq4_S_C15_A16	AAA	AA08	44	0.25	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

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Color by NtC (balls)

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Z

N

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