DNATCO v4.1: results

AMP RNA APTAMER COMPLEX, NMR, 8 STRUCTURES

Results of the assignment of 112 detected steps in 8 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1am0-m1_A_G6_G7	NAN	NANT	0	1.12	AA10
002	1am0-m2_A_G6_G7	NAN	NANT	0	1.11	AA10
003	1am0-m3_A_G6_G7	NAN	NANT	0	1.11	AA10
004	1am0-m4_A_G6_G7	NAN	NANT	0	1.09	AA10
005	1am0-m5_A_G6_G7	NAN	NANT	0	1.29	AA10
006	1am0-m6_A_G6_G7	NAN	NANT	0	1.66	AA10
007	1am0-m7_A_G6_G7	NAN	NANT	0	0.65	AA11
008	1am0-m8_A_G6_G7	NAN	NANT	0	0.51	AA11
009	1am0-m1_A_G7_G8	NAN	NANT	0	0.81	AA08
010	1am0-m2_A_G7_G8	NAN	NANT	0	0.93	AA05
011	1am0-m3_A_G7_G8	NAN	NANT	0	0.96	AA05
012	1am0-m4_A_G7_G8	NAN	NANT	0	1.15	AA08
013	1am0-m5_A_G7_G8	NAN	NANT	0	0.94	AB02
014	1am0-m6_A_G7_G8	NAN	NANT	0	0.86	AB02
015	1am0-m7_A_G7_G8	NAN	NANT	0	1.10	AA01
016	1am0-m8_A_G7_G8	NAN	NANT	0	0.89	AA05
017	1am0-m1_A_G8_A9	NAN	NANT	0	1.05	OP09
018	1am0-m2_A_G8_A9	NAN	NANT	0	1.07	OP09
019	1am0-m3_A_G8_A9	NAN	NANT	0	1.07	OP09
020	1am0-m4_A_G8_A9	NAN	NANT	0	0.53	OP03
021	1am0-m5_A_G8_A9	NAN	NANT	0	0.46	OP04
022	1am0-m6_A_G8_A9	NAN	NANT	0	0.81	OP03
023	1am0-m7_A_G8_A9	NAN	NANT	0	1.94	OP08
024	1am0-m8_A_G8_A9	NAN	NANT	0	1.25	OP04
025	1am0-m1_A_A9_A10	NAN	NANT	0	0.67	BA01
026	1am0-m2_A_A9_A10	NAN	NANT	0	0.69	BA01
027	1am0-m3_A_A9_A10	NAN	NANT	0	0.68	BB15
028	1am0-m4_A_A9_A10	AAA	AA08	42	0.45	AA08
029	1am0-m5_A_A9_A10	NAN	NANT	0	0.83	AB02
030	1am0-m6_A_A9_A10	NAN	NANT	0	0.62	BB15
031	1am0-m7_A_A9_A10	NAN	NANT	0	1.26	BA17
032	1am0-m8_A_A9_A10	NAN	NANT	0	0.95	BA17
033	1am0-m1_A_A10_G11	NAN	NANT	0	0.82	AA12
034	1am0-m2_A_A10_G11	NAN	NANT	0	0.82	AA12
035	1am0-m3_A_A10_G11	NAN	NANT	0	0.77	AA12
036	1am0-m4_A_A10_G11	NAN	NANT	0	0.81	AA12
037	1am0-m5_A_A10_G11	NAN	NANT	0	2.35	OP05
038	1am0-m6_A_A10_G11	NAN	NANT	0	0.82	AA12
039	1am0-m7_A_A10_G11	NAN	NANT	0	0.92	AA04
040	1am0-m8_A_A10_G11	NAN	NANT	0	0.98	AA12
041	1am0-m1_A_G11_A12	NAN	NANT	0	1.32	AA07
042	1am0-m2_A_G11_A12	NAN	NANT	0	1.31	AA07
043	1am0-m3_A_G11_A12	NAN	NANT	0	1.29	AA07
044	1am0-m4_A_G11_A12	NAN	NANT	0	1.34	AA07
045	1am0-m5_A_G11_A12	NAN	NANT	0	1.35	AA07
046	1am0-m6_A_G11_A12	NAN	NANT	0	1.35	AA07
047	1am0-m7_A_G11_A12	NAN	NANT	0	1.30	AA07
048	1am0-m8_A_G11_A12	NAN	NANT	0	1.29	AA07
049	1am0-m1_A_A12_A13	NAN	NANT	0	1.63	BB1S
050	1am0-m2_A_A12_A13	NAN	NANT	0	1.78	AA13
051	1am0-m3_A_A12_A13	NAN	NANT	0	1.81	AA13
052	1am0-m4_A_A12_A13	NAN	NANT	0	1.86	AA12
053	1am0-m5_A_A12_A13	NAN	NANT	0	1.50	OP27
054	1am0-m6_A_A12_A13	NAN	NANT	0	1.47	OP27
055	1am0-m7_A_A12_A13	NAN	NANT	0	1.78	BB2S
056	1am0-m8_A_A12_A13	NAN	NANT	0	1.44	AA01
057	1am0-m1_A_A13_A14	NAN	NANT	0	0.68	AA01
058	1am0-m2_A_A13_A14	NAN	NANT	0	0.58	BA01
059	1am0-m3_A_A13_A14	NAN	NANT	0	0.66	AA00
060	1am0-m4_A_A13_A14	NAN	NANT	0	0.94	AA00
061	1am0-m5_A_A13_A14	NAN	NANT	0	0.73	AA08
062	1am0-m6_A_A13_A14	NAN	NANT	0	0.69	AA00
063	1am0-m7_A_A13_A14	NAN	NANT	0	1.23	OP24
064	1am0-m8_A_A13_A14	NAN	NANT	0	0.90	BA09
065	1am0-m1_A_A14_C15	NAN	NANT	0	0.58	AA01
066	1am0-m2_A_A14_C15	NAN	NANT	0	0.64	AA01
067	1am0-m3_A_A14_C15	AAA	AA00	11	0.50	AA00
068	1am0-m4_A_A14_C15	A-B	AB05	9	0.55	AB05
069	1am0-m5_A_A14_C15	AAA	AA00	38	0.40	AA00
070	1am0-m6_A_A14_C15	NAN	NANT	0	0.69	AA01
071	1am0-m7_A_A14_C15	NAN	NANT	0	1.15	AA01
072	1am0-m8_A_A14_C15	NAN	NANT	0	1.60	OP08
073	1am0-m1_A_C15_U16	NAN	NANT	0	0.98	AA00
074	1am0-m2_A_C15_U16	NAN	NANT	0	0.85	AA05
075	1am0-m3_A_C15_U16	NAN	NANT	0	0.67	AA05
076	1am0-m4_A_C15_U16	NAN	NANT	0	0.93	BA10
077	1am0-m5_A_C15_U16	NAN	NANT	0	0.89	AA00
078	1am0-m6_A_C15_U16	NAN	NANT	0	0.98	AA00
079	1am0-m7_A_C15_U16	NAN	NANT	0	0.55	AA05
080	1am0-m8_A_C15_U16	NAN	NANT	0	0.60	AA01
081	1am0-m1_A_U16_G17	AAA	AA08	33	0.48	AA08
082	1am0-m2_A_U16_G17	NAN	NANT	0	0.70	AB02
083	1am0-m3_A_U16_G17	NAN	NANT	0	0.66	AA03
084	1am0-m4_A_U16_G17	NAN	NANT	0	0.60	AA03
085	1am0-m5_A_U16_G17	NAN	NANT	0	0.57	AA11
086	1am0-m6_A_U16_G17	NAN	NANT	0	1.39	OP24
087	1am0-m7_A_U16_G17	NAN	NANT	0	1.32	AA06
088	1am0-m8_A_U16_G17	AAA	AA08	62	0.50	AA08
089	1am0-m1_A_G17_U18	NAN	NANT	0	0.56	AA11
090	1am0-m2_A_G17_U18	AAA	AA00	19	0.41	AA00
091	1am0-m3_A_G17_U18	NAN	NANT	0	1.27	OP08
092	1am0-m4_A_G17_U18	NAN	NANT	0	1.30	OP08
093	1am0-m5_A_G17_U18	NAN	NANT	0	1.38	OP08
094	1am0-m6_A_G17_U18	NAN	NANT	0	1.44	OP24
095	1am0-m7_A_G17_U18	NAN	NANT	0	1.12	OP08
096	1am0-m8_A_G17_U18	NAN	NANT	0	1.24	OP08
097	1am0-m1_A_A33_G34	NAN	NANT	0	0.59	AB2S
098	1am0-m2_A_A33_G34	NAN	NANT	0	1.10	BB14
099	1am0-m3_A_A33_G34	NAN	NANT	0	1.50	OP08
100	1am0-m4_A_A33_G34	NAN	NANT	0	1.01	AB02
101	1am0-m5_A_A33_G34	NAN	NANT	0	0.82	AB02
102	1am0-m6_A_A33_G34	NAN	NANT	0	0.84	AB02
103	1am0-m7_A_A33_G34	NAN	NANT	0	1.40	OP08
104	1am0-m8_A_A33_G34	NAN	NANT	0	1.41	OP08
105	1am0-m1_A_G34_C35	NAN	NANT	0	1.60	ZZS2
106	1am0-m2_A_G34_C35	NAN	NANT	0	1.30	OP31
107	1am0-m3_A_G34_C35	NAN	NANT	0	0.84	OPS1
108	1am0-m4_A_G34_C35	NAN	NANT	0	1.10	OPS1
109	1am0-m5_A_G34_C35	NAN	NANT	0	1.01	OPS1
110	1am0-m6_A_G34_C35	NAN	NANT	0	1.90	OP15
111	1am0-m7_A_G34_C35	NAN	NANT	0	1.61	OP19
112	1am0-m8_A_G34_C35	NAN	NANT	0	1.56	OP19

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 112 detected steps in 8 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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